Splunk service won't start after upgrading Palo Alto Networks App for Splunk to 5.0. "Problem parsing indexes.conf: stanza=flowintegrator Required parameter=homePath not configured"

I ran the upgrade to 5.0 of the Palo app and now Splunk won't start. When I try to start the service I get the below error. Checking prerequisites... Checking http port [8000]: open Checking mgmt port [8089]: open Checking appserver port [127.0.0.1:8065]: open Checking kvstore port [8191]: open Checking configuration... Done. Checking critical directories... Done Checking indexes... Problem parsing indexes.conf: stanza=flowintegrator Required parameter=homePath not configured Validating databases (splunkd validatedb) failed with code '1'. If you cannot resolve the issue(s) above after consulting documentation, please file a case online at http://www.splunk.com/page/submit_issue I looked at the indexes.conf and saw that it was missing the paths to the DB's, so I added them, but it didn't make a difference. [pan_logs] maxTotalDataSizeMB = 800000 homePath = /opt/splunk/var/lib/splunk/pan_logs/db coldPath = /opt/splunk/var/lib/splunk/pan_logs/colddb thawedPath = /opt/splunk/var/lib/splunk/pan_logs/thaweddb [flowintegrator] maxTotalDataSizeMB = 10000